LAMMPS (27 Nov 2018)
  using 1 OpenMP thread(s) per MPI task
# 2d polygon nparticle bodies

units		lj
dimension       2
atom_style	body nparticle 2 6

read_data       data.body
  orthogonal box = (-15.5322 -15.5322 -0.5) to (15.5322 15.5322 0.5)
  1 by 1 by 1 MPI processor grid
  reading atoms ...
  100 atoms
  100 bodies

velocity	all create 1.44 87287 loop geom

pair_style	body/nparticle 5.0
pair_coeff	* * 1.0 1.0

neighbor	0.5 bin
neigh_modify    every 1 delay 0 check yes

fix		1 all nve/body
#fix		1 all nvt/body temp 1.44 1.44 1.0
fix		2 all enforce2d

#compute         1 all body/local type 1 2 3
#dump            1 all local 100 dump.body index c_1[1] c_1[2] c_1[3] c_1[4]

#dump		2 all image 1000 image.*.jpg type type #		zoom 1.6 adiam 1.5 body type 1.0 0
#dump_modify    2 pad 5

thermo          100
run		10000
Neighbor list info ...
  update every 1 steps, delay 0 steps, check yes
  max neighbors/atom: 2000, page size: 100000
  master list distance cutoff = 5.5
  ghost atom cutoff = 5.5
  binsize = 2.75, bins = 12 12 1
  1 neighbor lists, perpetual/occasional/extra = 1 0 0
  (1) pair body/nparticle, perpetual
      attributes: half, newton on
      pair build: half/bin/atomonly/newton
      stencil: half/bin/2d/newton
      bin: standard
Per MPI rank memory allocation (min/avg/max) = 4.772 | 4.772 | 4.772 Mbytes
Step Temp E_pair E_mol TotEng Press 
       0         1.44  -0.63799525            0   0.78760475  -0.15028724 
     100     1.642337   -1.0003869            0   0.62552682   0.16140818 
     200     1.470473   -1.2465469            0   0.20922135   0.35146925 
     300    1.4834687   -1.3464946            0   0.12213946   0.40783535 
     400    1.5075814   -1.6170041            0  -0.12449852   0.11302717 
     500    1.5681124   -1.6060641            0 -0.053632801   0.23819933 
     600    1.7129405   -1.6939468            0 0.0018642497   0.46490776 
     700    1.5803869   -1.6182998            0 -0.053716823   0.36807869 
     800    1.6454324   -1.6537709            0 -0.024792836   0.21305673 
     900    1.5454528   -1.6310447            0  -0.10104644   0.22323772 
    1000    1.7596217   -1.7290976            0  0.012927885   0.12600944 
    1100    1.3845533    -1.635035            0  -0.26432721   0.31778997 
    1200    1.6448321   -1.6985254            0 -0.070141617   0.14347958 
    1300    1.6158541    -1.581817            0  0.017878542   0.16186588 
    1400    1.4702758   -1.5210898            0 -0.065516797   0.35241206 
    1500    1.5746718   -1.5427933            0  0.016131764   0.21832857 
    1600    1.5276572   -1.6755951            0  -0.16321447 -0.046196207 
    1700    1.8182153   -1.7471337            0  0.052899504   0.14576284 
    1800    1.8054446   -1.8814075            0 -0.094017352   0.11678153 
    1900    1.6318148    -1.636557            0 -0.021060353   0.29300401 
    2000    1.6187604   -1.5563087            0  0.046264125   0.35910875 
    2100    1.8270056   -1.9189599            0  -0.11022441 -0.031374982 
    2200    1.8203075   -1.8672658            0 -0.065161309   0.38667462 
    2300    2.1336292   -1.8962621            0    0.2160309   0.13286893 
    2400      1.79223   -1.7128682            0  0.061439536   0.30570635 
    2500    1.7208941   -1.6955053            0 0.0081798834   0.24562038 
    2600    1.7755824   -1.7744614            0 -0.016634836   0.11148721 
    2700    1.7308273    -1.744062            0 -0.030542972   0.17938105 
    2800    1.7059134   -1.6131603            0  0.075694024   0.06746694 
    2900    1.7152544    -1.665102            0  0.032999854   0.14918116 
    3000    1.7917767   -1.6654545            0   0.10840436   0.22990289 
    3100    1.7153899   -1.8140872            0  -0.11585128    0.1070804 
    3200    1.5704305   -1.5645642            0 -0.0098380461   0.30331339 
    3300    1.6707504   -1.6224865            0   0.03155641   0.21402203 
    3400    1.7390711   -1.6969145            0  0.024765924   0.25633302 
    3500    1.7601895   -1.7159833            0  0.026604288   0.10350991 
    3600    1.7796243   -1.6848496            0  0.076978483   0.24287746 
    3700    1.8883198   -1.7216992            0   0.14773748  0.071179538 
    3800    1.5757461   -1.6445584            0 -0.084569808   0.23580968 
    3900    1.5509957   -1.6221122            0 -0.086626425    0.2208604 
    4000    1.7403415   -1.6515882            0  0.071349901     0.171317 
    4100    1.6394046     -1.69549            0 -0.072479406   0.18077211 
    4200     1.788413   -1.6410039            0   0.12952501   0.41737981 
    4300    1.7211754   -1.6535323            0  0.050431306    0.1688929 
    4400    1.6034779   -1.7771275            0  -0.18968442  0.091947982 
    4500    1.5692666   -1.6176359            0 -0.064061965   0.31716418 
    4600    1.6454802   -1.5764942            0  0.052531194  0.021026463 
    4700    1.4715049    -1.582096            0  -0.12530612   0.17687943 
    4800    1.5615071   -1.6276031            0 -0.081711137  0.077798682 
    4900    1.6407636    -1.622773            0 0.0015829265   0.28751203 
    5000    1.6390013   -1.7257036            0  -0.10309236   0.35133795 
    5100    1.6540912   -1.7056399            0 -0.068089648   0.52254354 
    5200    1.6438013   -1.7568895            0  -0.12952624   0.16423828 
    5300    1.6791806    -1.756297            0 -0.093908192    0.3151943 
    5400    1.7527095    -1.729977            0 0.0052053655   0.29874227 
    5500    1.7604924   -1.6920395            0  0.050847912    0.2062502 
    5600    1.8225025   -1.6746221            0   0.12965535   0.29423091 
    5700    1.6896356   -1.6591445            0  0.013594822   0.41582329 
    5800     1.575776   -1.6605307            0  -0.10051246   0.17434812 
    5900    1.6893771   -1.6046258            0  0.067857462     0.188486 
    6000    1.6506959   -1.6295482            0 0.0046407782   0.18737656 
    6100    1.8137143   -1.6634096            0   0.13216758   0.22425414 
    6200    1.6337368   -1.6016206            0  0.015778794   0.17026591 
    6300    1.6232904   -1.7102709            0  -0.10321339   0.22621086 
    6400    1.8146767   -1.7354533            0  0.061076657   0.25907309 
    6500    1.5565608   -1.8652953            0  -0.32430015  0.096916202 
    6600    1.6366532     -1.65732            0 -0.037033272   0.30276466 
    6700    1.6612051   -1.6621545            0 -0.017561423   0.16685109 
    6800    1.5574268   -1.6082827            0 -0.066430166   0.37630931 
    6900    1.6556225   -1.6744213            0 -0.035355078   0.11599545 
    7000    1.5078585   -1.6049482            0  -0.11216833   0.37716682 
    7100    1.6147622   -1.7044793            0  -0.10586467   0.48915924 
    7200    1.8022216   -1.7117836            0  0.072415791   0.24007939 
    7300    1.6302834   -1.8522784            0  -0.23829784   0.19326557 
    7400    1.7108472   -1.8993043            0  -0.20556558   0.34554364 
    7500    1.8570536   -1.7135598            0   0.12492326   0.53728185 
    7600    1.7812105   -1.7239897            0  0.039408716   0.44348124 
    7700    1.8724942   -1.7871204            0  0.066648837    0.2529344 
    7800    1.8237412   -1.6467621            0   0.15874169    0.2354529 
    7900    1.7222899   -1.7254585            0  -0.02039155   0.13271481 
    8000       1.6839   -1.5913695            0  0.075691547  0.011932379 
    8100     1.599835    -1.672507            0 -0.088670351   0.11203274 
    8200    1.8369376   -1.7464532            0  0.072115105   0.21380276 
    8300    1.9603301   -1.9121791            0   0.02854768   0.18178367 
    8400    1.7903688   -1.8798475            0  -0.10738231   0.37173469 
    8500     1.687183    -1.760587            0 -0.090275846   0.23751647 
    8600    1.6515772   -1.7918091            0  -0.15674775  0.099895142 
    8700    1.7083909   -1.7297068            0 -0.038399775   0.57093506 
    8800    1.6150569   -1.6976608            0 -0.098754502   0.15348519 
    8900    1.5452011   -1.7517421            0  -0.22199306   0.22143091 
    9000    1.7498686   -1.8569695            0  -0.12459962    0.1989093 
    9100    1.6287336   -1.7505293            0  -0.13808305   0.23881397 
    9200    1.5431194   -1.6845999            0  -0.15691169   0.10646288 
    9300    1.4900229   -1.5671955            0 -0.092072887   0.31588548 
    9400     1.523362   -1.5531592            0 -0.045030785   0.21546483 
    9500    1.5783775     -1.65292            0 -0.090326215   0.25980559 
    9600    1.9192786   -1.9303222            0 -0.030236392 -0.0046632743 
    9700     1.747544   -1.7886479            0 -0.058579385   0.38543046 
    9800    1.6713187   -1.6842507            0 -0.029645137   0.17982115 
    9900    1.7707351   -1.6638268            0  0.089200949    0.2983883 
   10000    1.6466807    -1.592436            0  0.037777866   0.12761693 
Loop time of 1.76365 on 1 procs for 10000 steps with 100 atoms

Performance: 2449465.017 tau/day, 5670.058 timesteps/s
98.9% CPU use with 1 MPI tasks x 1 OpenMP threads

MPI task timing breakdown:
Section |  min time  |  avg time  |  max time  |%varavg| %total
---------------------------------------------------------------
Pair    | 1.5533     | 1.5533     | 1.5533     |   0.0 | 88.08
Neigh   | 0.01155    | 0.01155    | 0.01155    |   0.0 |  0.65
Comm    | 0.042146   | 0.042146   | 0.042146   |   0.0 |  2.39
Output  | 0.00089574 | 0.00089574 | 0.00089574 |   0.0 |  0.05
Modify  | 0.14124    | 0.14124    | 0.14124    |   0.0 |  8.01
Other   |            | 0.01448    |            |       |  0.82

Nlocal:    100 ave 100 max 100 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost:    82 ave 82 max 82 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs:    467 ave 467 max 467 min
Histogram: 1 0 0 0 0 0 0 0 0 0

Total # of neighbors = 467
Ave neighs/atom = 4.67
Neighbor list builds = 468
Dangerous builds = 0
Total wall time: 0:00:01
